python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T155_b4_Brain_PCW10 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T155_b4_Brain_PCW10.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T183_b4_Brain_PCW19 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T183_b4_Brain_PCW19.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T382_b4_Brain_PCW15 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T382_b4_Brain_PCW15.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T47_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T47_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T63_b4_Brain_PCW20 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T63_b4_Brain_PCW20.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T64_b4_Brain_PCW18 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T64_b4_Brain_PCW18.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T94_b4_Brain_PCW17 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T94_b4_Brain_PCW17.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL41_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL43_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL44_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL45_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL46_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL48_b4_ATAC_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end1.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end1.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L1-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L2-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L3-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-0-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-1-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-2-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-3-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-4-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-5-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-6-9/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-0/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-1/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-2/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-3/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-4/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-5/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-6/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-7/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL57_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL59_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL60_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL61_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL62_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz
python /oak/stanford/groups/akundaje/marinovg/code/single-cell-RNA-seq/SHARE-seq-FASTQ_barcode_subset.py L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.RNA_UMI.end2.fastq.gz 2 barcode_T129_b4_Brain_PCW22 2 -revcomp | gzip > L4-7-8/SL64_b4_RNA_brain.barcodes_annotated.barcode_T129_b4_Brain_PCW22.RNA_UMI.end2.fastq.gz